DE Africa Waterbodies: A Waterbodies Monitoring Service

Date modified: 1 November 2023

This is a beta product, released for evaluation by all users. The DE Africa team is working actively to validate and improve this product.

Service Overview

Background

The Digital Earth Africa continental Waterbodies Monitoring Service identifies more than 600,000 water bodies from over three decades of satellite observations. This service maps persistent and seasonal water bodies and the change in their water surface area over time. Mapped water bodies may include, but are not limited to, lakes, ponds, man-made reservoirs, wetlands, and segments of some river systems.

On a local, regional, and continental scale, this service helps improve our understanding of surface water dynamics and water availability and can be used for monitoring water bodies such as wetlands, lakes and dams in remote and/or inaccessible locations.

Specifications

There are several products available as part of the Waterbodies service.

A Jupyter Notebook that demonstrates loading and using the Waterbodies products in the Sandbox is also available.

Table 1: Waterbodies Service products

Product type

Description

Data type

Waterbodies Historical Extent

Static water body outlines. The outlines map where water was present in at least 5% of clear satellite acquisitions since 1987.

Vector - polygon

Waterbodies Surface Area Change

Dynamic time series of the wet, dry, and unobserved surface area as a proportion of the historical water body extent.

CSV

Table 2: Waterbodies Service specifications

Service name

DE Africa Waterbodies Service

DE Africa Waterbodies Service

Product name

Waterbodies Historical Extent

Waterbodies Surface Area Change

Cell size – X (metres)

30

30

Cell size – Y (metres)

30

30

Coordinate reference system

ESPG:6933

ESPG:6933

Temporal resolution

Single historical extent derived from the full temporal range

16 days

Temporal range

1987 - 2022

To be determined when product is operational

Parent dataset

WOfS All-Time Summary

WOfS Feature Layer

Update frequency

To be determined when product is operational

To be determined when product is operational

Figure 1: DE Africa Waterbodies Service geographic extent

Coastlines data extent.

DE Africa Waterbodies is a continental service that includes historical extent of individual water bodies and a time series of the surface area of water within the water body. This service uses the Water Observations from Space products and has been generated within the bounds of the HydroSHEDS land mask.

Waterbodies Historical Extent

Table 3: Waterbodies Historical Extent attribute descriptions

Attribute

UID

A unique identifier determined from the water body’s location. Each water body polygon is named using a geohash, which represents the lat/lon coordinates of the centre of the water body polygon mapped into a shorter character string. A geohash can be converted back into a lat/lon pair.

WB_ID

An alternative identifier that assigns an integer value to every water body. Water bodies with similar WB_ID values are located close together.

perim_m

The perimeter of the water body, measured in metres.

area_m2

The area of the waterbody, measured in metres squared.

timeseries

The Amazon S3 location of the Surface Area Change time series for the water body.

Waterbodies Surface Area Change

Table 4: Waterbodies Surface Area Change attribute descriptions

Attribute

date

The date of the satellite image acquisition used to measure the wet, dry, and invalid surface area of the water body.

pc_wet

The percentage of water body’s historical extent that has been classified as ‘wet’.

px_wet

The total number of pixels within the water body’s historical extent that have been classified as ‘wet’.

area_wet_m2

The total area within the water body’s historical extent that has been classified as ‘wet’, measured in metres squared.

pc_dry

The percentage of the water body’s historical extent that has been classified as ‘dry’.

px_dry

The total number of pixels within the water body’s historical extent that have been classified as ‘dry’.

area_dry_m2

The total area within the water body’s historical extent that has been classified as ‘dry’, measured in metres squared.

pc_invalid

The percentage of the water body’s historical extent that has been classified as ‘invalid’. An area is classified as ‘invalid’ if it was not clearly observed in the satellite acquisition.

px_invalid

The total number of pixels within the water body’s historical extent that have been classified as ‘invalid’.

area_invalid_m2

The total area within the water body’s historical extent that has been classified as ‘invalid’, measured in metres squared.

Processing

The DE Africa Waterbodies Historical Extent product is a static polygon-based view of the DE Africa Water Observations from Space All-Time Summary product. The historical extent represents where water has appeared in at least 5% of clear observations since 1987. It is not a capture of a water body’s true extent in any given year, but a record of where water has appeared since 1987.

Water body historical extent polygons are defined as contiguous sets of pixels that were classified as wet in at least 5% of clear observations since 1987. To be retained, the historical extent polygons must also include a contiguous set of pixels that were classified as wet in at least 10% of clear observations since 1987. This criteria helps to select permanent and seasonal water bodies while ignoring highly-irregular flooding events.

For each water body, the Surface Area Change product provides the percentage of the historical extent that was classified as wet, dry, or invalid, for each Water Observation from Space Feature Layer scene that captured the water body. This measure is also provided as the number of wet, dry, and invalid pixels, and the total area classified as wet, dry, and invalid. Percentage measurements are only calculated when the Water Observation from Space Feature Layer scene clearly captures at least 90% of the historical extent, which is considered enough of the water body to give a reliable percentage measurement of the wet and dry coverage.

The scripts used to produce the DE Africa Waterbodies Historical Extent product are available from the DE Africa Waterbodies GitHub repository. The scripts used to produce the DE Africa Waterbodies Surface Area Change product are available from the DE Africa Conflux GitHub repository.

References

Krause, Claire E.; Newey, Vanessa; Alger, Matthew J.; Lymburner, Leo. 2021. “Mapping and Monitoring the Multi-Decadal Dynamics of Australia’s Open Waterbodies Using Landsat” Remote Sens. 13, no. 8: 1437. https://doi.org/10.3390/rs13081437

Mueller, N., Lewis, A., Roberts, D., Ring, S., Melrose, R., Sixsmith, J., Lymburner, L., McIntyre, A., Tan, P., Curnow, S., & Ip, A. (2016). Water observations from space: Mapping surface water from 25 years of Landsat imagery across Australia. Remote Sensing of Environment, 174, 341–352. https://doi.org/10.1016/j.rse.2015.11.003

License

CC BY Attribution 4.0 International License

Acknowledgments

The DE Africa Waterbodies workflow is adapted from the workflow originally developed by Geoscience Australia. Digital Earth Africa thanks the Digital Earth Africa Product Development task team for the co-design, the co-development and early feedback on the Service.

Data Access

Amazon Web Service S3

The Digital Earth Africa Waterbodies products can be accessed from the associated S3 bucket.

Table 5: AWS data access details

AWS S3 details

Bucket ARN

arn:aws:s3:::deafrica-services

Product names

waterbodies

Region

af-south-1

Version 0.0.1 (beta) of the DE Africa Waterbodies Historical Extent product can be downloaded from the links below:

OGC Web Services (OWS)

This product is available through DE Africa’s OWS.

Table 6: OWS data access details

OWS details

Name

DE Africa Services

Web Map Services (WMS) URL

https://geoserver.digitalearth.africa/geoserver/wms

Web Feature Services (WFS) URL

https://geoserver.digitalearth.africa/geoserver/wfs

Layer names

DEAfrica_Waterbodies

DE Africa Sandbox

The Waterbodies Service can be loaded and analysed in the DE Africa Sandbox following the example Jupyter Notebook.

For further information regarding the use of DE Africa Water Bodies Service, visit the Digital Earth Africa Help Desk.

Technical information

The DE Africa Water Bodies Service is comprised of two main products:

  • Waterbodies Historical Extent: a polygon dataset of static water body outlines. The outlines map where water was observed in at least 5% of clear satellite acquisitions since 1987.

  • Waterbodies Surface Area Change: a CSV time series capturing the wet, dry, and invalid surface area for each individual water body polygon for every available Water Observations from Space Feature Layer scene.

Waterbodies Historical Extent

Update frequency

The DE Africa Waterbodies Historical Extent product is currently generated as a one-off product from the DE Africa Water Observations from Space All-Time Summary product.

Inaccuracies and limitations

Missing water bodies

There are a few factors why a water body might be missing from this service.

  • It might be too small: the Waterbodies Historical Extent only maps water bodies larger than 4,500m2 (5 Landsat pixels).

  • It might not be wet enough: the Waterbodies Historical Extent only maps water bodies that have been observed as wet 10% of the time between 1987 to 2022. If a water body fills infrequently, it may not meet this threshold.

  • The waterbody might have too much vegetation surrounding it: the DE Africa Water Observations from Space classifier, which determines where water is observed, does not work well where water is mixed with vegetation. If there is vegetation obscuring the water (like a tree leaning across a river or a wetland), the classifier may not see this as water and the water body may not be mapped.

  • The water in the water body does not look like water: dense sediment-filled water is often misclassified as land.

  • The water body might be new: newly constructed/formed water bodies will not be included in this service as they will not have been observed as wet at least 10% of the time between 1987 to 2022.

Missing river segments

The DE Africa Water Observations from Space Classifier, which determines where water is observed, does not work well where water is combined with vegetation. If there is vegetation obscuring the water (like a tree leaning across a river), the classifier may not see this as water, and the water body may be truncated, even though the river continues along underneath the vegetation.

Additionally, the Water Observations from Space Feature Layers product (used to produce the Waterbodies Historical Extent product) has a pixel resolution of 30 metres by 30 metres. A pixel will only be classified as water where the pixel is almost entirely made up of water. For example, in areas where rivers narrow or contain large sandbanks, the pixel will include these other signatures and not be classified as water. Both of these factors mean that some rivers are not seen as continuous features in the Waterbodies Historical Extent product.

Incomplete water bodies extent

Some of the Waterbodies Historical Extent polygons contain holes or are irregularly shaped. This is caused by the DE Africa Water Observations from Space classifier not seeing parts of the water body frequently enough; a pixel must be clearly observed at least 128 times to be included. Additionally the DE Africa Water Observations from Space classifier that determines where water is observed does not work well where water is combined with vegetation. If there is vegetation obscuring the water (like a tree leaning across a river or a wetland), the classifier may not see this as water and the resulting mapped waterbody may contain holes.

Water bodies fused instead of being separate

Waterbodies Historical Extent polygons are mapped using classified pixels from the Water Observations from Space Feature Layers product. If a pixel is predominantly water, it will be mapped as water. Small levees or roads between adjacent water bodies will not necessarily separate the mapped water bodies if they are not large enough to influence the total make up of their pixel. This means that some separate water bodies are mapped as a single waterbody within the Waterbodies Historical Extent.

Mapping flooded areas

By design, we have excluded locations where water is seen only during extreme flood events. A wetness threshold of 10% was applied to the data, meaning that only water bodies observed as wet at least 10% of the time between 1987 and 2022 have been included. This threshold was determined to be sensitive enough to capture the locations of persistent water bodies, but not so sensitive as to pick up too many false positives like flood irrigation, flood events or soggy areas in the landscape.

Water Bodies Surface Area Change

Update frequency

The DE Africa Waterbodies Surface Area Change product will be updated regularly once the service becomes operational. An individual time series may not be updated with new percentage coverage measurements within the expected 16 day cadence if it was cloudy on the days the relevant data was acquired and processed. Landsat satellites do not observe all of Africa at the same time. The dates of satellite observations are dependent on the date that the satellite observed that waterbody.

All usable observations for each water body have been included in the Surface Area Change time series for that water body. Short or missing time series can result from frequent cloud cover, misclassification, or other processing issues. If less than 90% of the total water body is observed on any one day, due to cloud cover or missing data, then the wet and dry percentages are not calculated in the Surface Area Change time series. Cloud cover leading to invalid data can be a particular problem in coastal regions.

Inaccuracies and limitations

Dealing with cloud cover

Data used within DE Africa Waterbodies Surface Area Change product is cloud masked. When a significant fraction of a water body is not observed, due to cloud cover or missing data, estimation of wet area as a percentage of total area is not reliable. Therefore, the wet and dry percentages are not calculated when less than 90% of the total water body is observed on any one day.

Irregularly spaced time series

Landsat satellites do not observe all of Africa at the same time. The dates of satellite observations are dependent on the date that a satellite observed that water body. Currently, the Water Observations from Space Feature Layers product has a temporal resolution of 16 days.

No distinction between water sources

This service does not differentiate between water sources, whether the water is from a natural or artificial water supply

No measurement of water body volume

This service does not measure the volume of water in any water body. This tool detects the wet surface area of a water body. The wet surface area does not necessarily correlate to the volume of water in a storage. For example, a water body can be observed as wet with just a shallow covering of water.